BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B10SP1|AL427443
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1669 1883 0.0
>3x_Contig1669
Length = 15503
Score = 1883 bits (945), Expect = 0.0
Identities = 966/975 (99%), Gaps = 2/975 (0%)
Strand = Plus / Plus
Query: 1 atctttcctcggtgcccgtgtagcttagtatttcgtatcatctgtttcaatgccaattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3370 atctttcctcggtgcccgtgtagcttagtatttcgtatcatctgtttcaatgccaattgt 3429
Query: 61 gtaagactcaccgaactcatgaagttgacattcataatgtcagccatctcgttggtatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3430 gtaagactcaccgaactcatgaagttgacattcataatgtcagccatctcgttggtatta 3489
Query: 121 gccttgatagcggctgtagtttgcgtaattccggcacaatttaccaagagatcaagtcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3490 gccttgatagcggctgtagtttgcgtaattccggcacaatttaccaagagatcaagtcgg 3549
Query: 181 tactgtttcttatcaaagccagccattagatcgttcgattcgattttwgtctctatcttg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3550 tactgtttcttatcaaagccagccattagatcgttcgattcgattttagtctctatcttg 3609
Query: 241 ccatttcgacaaatgaactggctccaagtggtatcaacccatgttggccagcccttaawa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3610 ccatttcgacaaatgaactggctccaagtggtatcaacccatgttggccagcccttaaaa 3669
Query: 301 ttgatcgatatacctttagcaaattgaccatggttcaatttgatgcgtggttggtttttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3670 ttgatcgatatacctttagcaaattgaccatggttcaatttgatgcgtggttggtttttg 3729
Query: 361 acaacggagtcgtcgttactaccaatatatatwaccgaatatccgcttagtaacagctca 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3730 acaacggagtcgtcgttactaccaatatatataaccgaatatccgcttagtaacagctca 3789
Query: 421 tctcggatcttggaccctattcctctggttgctccactcacaatggaaacaaggttttgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3790 tctcggatcttggaccctattcctctggttgctccactcacaatggaaacaaggttttgc 3849
Query: 481 ttcattgagtacagtttaccagcttgcctacaaaawtttgaaactgaagtgggtatattc 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3850 ttcattgagtacagtttaccagcttgcctacaaaaatttgaaactgaagtgggtatattc 3909
Query: 541 taacagtcttattacgtatcggacatttgccatgtaaacggttttgaatttttctttaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3910 taacagtcttattacgtatcggacatttgccatgtaaacggttttgaatttttctttaat 3969
Query: 601 gttaaggaaaactatttacgaatctaaacattccgatgtaaatwataaatgahagccttg 660
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 3970 gttaaggaaaactatttacgaatctaaacattccgatgtaaataataaatgaaagccttg 4029
Query: 661 ttggtattcatgtagtatcaacaaatcacgtgagccaacatcttagaatcgcccggggtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4030 ttggtattcatgtagtatcaacaaatcacgtgagccaacatcttagaatcgcccggggtc 4089
Query: 721 ccaaatataataagtatgaaatcattgcagcttacaataatatctcttgaagaagtttat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4090 ccaaatataataagtatgaaatcattgcagcttacaataatatctcttgaagaagtttat 4149
Query: 781 accttttagtagaaacctcttgaagtttgagaggagtagtcatacgaggaataaccgtaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4150 accttttagtagaaacctcttgaagtttgagaggagtagtcatacgaggaataaccgtaa 4209
Query: 841 ggcataccttgctgagcttgttgttgtggttgagtttgagcttgttgatattgatagtat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4210 ggcataccttgctgagcttgttgttgtggttgagtttgagcttgttgatattgatagtat 4269
Query: 901 tgctggtactgttgakatgcattggcagcattagcattggca-caccttgttga-catta 958
||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 4270 tgctggtactgttgagatgcattggcagcattagcattggcaccaccttgttgaccatta 4329
Query: 959 gcttgttcctcttca 973
|||||||||||||||
Sbjct: 4330 gcttgttcctcttca 4344
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6698
Number of Sequences: 1807
Number of extensions: 6698
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)